| parameter name |
parameter value |
| bin_dir |
/opt/ergatis/bin |
| bsml_output_list |
/mnt/projects/clovr/output_repository/muscle/55_default/muscle.bsml.list |
| classification |
alignment / multiple |
| component_config |
/mnt/projects/clovr/workflow/runtime/muscle/55_default/muscle.default.final.config |
| component_name |
muscle |
| component_xml |
/mnt/projects/clovr/workflow/runtime/muscle/55_default/component.xml |
| componenturl |
/mnt/projects/clovr/workflow/runtime/muscle/55_default/component.xml |
| compress_raw_output |
1 |
| debug |
0 |
| ergatis_dir |
/opt/ergatis |
| fasta_nr_peptide |
/mnt/staging/db/panda/AllGroup/AllGroup.fasta |
| group_count |
150 |
| hmm_all |
/mnt/staging/db/coding_hmm/coding_hmm.lib.bin |
| input_extension |
fsa |
| input_file_list |
/mnt/projects/clovr/output_repository/mugsycog/55_default/mugsycog.fsa.list |
| iterator1 |
i1 |
| iterator1_xml |
/opt/ergatis/docs/muscle.i1.xml |
| lib_dir |
/opt/ergatis/lib |
| nodistrib |
0 |
| output_directory |
/mnt/projects/clovr/output_repository/muscle/55_default |
| output_token |
default |
| pipeline_token |
unnamed |
| pipeline_xml |
/mnt/projects/clovr/workflow/runtime/pipeline/55/pipeline.xml |
| pipelineid |
55 |
| pipelineurl |
/mnt/projects/clovr/workflow/runtime/pipeline/55/pipeline.xml |
| project |
new |
| project_config |
/mnt/projects/clovr/workflow/project.config |
| project_id_repository |
/mnt/projects/clovr/workflow/project_id_repository |
| raw_output_list |
/mnt/projects/clovr/output_repository/muscle/55_default/muscle.raw.list |
| release_tag |
$Name: $ |
| repository_root |
/mnt/projects/clovr |
| revision |
$Revision: 1.10 $ |
| simple_repeat_lib |
/usr/local/devel/ANNOTATION/RepeatMasker20020713/Libraries/simple.lib |
| software_config |
/opt/ergatis/software.config |
| template_xml |
/opt/ergatis/docs/muscle.xml |
| tmp_dir |
/mnt/scratch/ergatis/new/muscle/55_default |
| workflow_repository |
/mnt/projects/clovr/workflow/runtime/muscle/55_default |